LOCUS BG070176 555 bp mRNA linear EST 12-MAY-2010 DEFINITION H3084E07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3084E07 3', mRNA sequence. ACCESSION BG070176 VERSION BG070176.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 555) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070176.1. Other_ESTs: H3084E07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3084 row: E column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..555 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3084E07-3" /db_xref="taxon:10090" /clone="H3084E07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 163 a 157 c 83 g 152 t ORIGIN 1 atcagccatt tagcagaagc caattctaga tgaacccaag tcaccatttt ctcatgtatt 61 cagaaagtct tgtaagaccg ggcttaccct catcccccac acctctccct ggacaacttc 121 tgtgcacaat actcagacac tccaaaccct tttcagtctc acctgcacct cccctaccgc 181 cccaccaatc ccggctttcc acctctaaat ttacaaacct gcatccacta actttaattt 241 gagccctggc cagagtaagg cattctcaga cagaaacagc tcacgagaaa tgatatattt 301 tcccctataa cagataaacc cttgatgaag atttatgtac agataatgat gacctctgga 361 agaatactca gaggcagatt tttgattttg actttgtaaa caacctgcta cctttttcga 421 aaccgttgtc tcaaacgtct cccggtaatg gaggggcaat ttccaatcat ttttctagca 481 gatgtaacgt tatctgaaca tccacaagcc ataatgtggc aataccatgt aaccttctcc 541 tacaaatggc actta //