LOCUS BG070075 672 bp mRNA linear EST 12-MAY-2010 DEFINITION H3082E02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3082E02 3', mRNA sequence. ACCESSION BG070075 VERSION BG070075.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 672) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070075.1. Other_ESTs: H3082E02-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3082 row: E column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..672 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3082E02-3" /db_xref="taxon:10090" /clone="H3082E02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 196 a 162 c 136 g 178 t ORIGIN 1 aatctttatg ttcctttatt ggagcaagat tcctgacgta tacagtgatg tatttactaa 61 acagagtcct gtgcagaaat tacacactat ccatctagac agattttggt tacactttgc 121 ctattgatgg agtagttcca tttataaagt tttatacatc agaaagcttt gaatttgacc 181 aggctgtcca ttaatcatct ctgaaaaagt ggcattgaat tttagctcta ttttacagca 241 ttaaaaagct tacgcatcag gtagcttccc aaacattatc ctctgcccga tggcgctgag 301 cagacagctc ttcatccacc tacgtcagtc tcacatctga gagcttctgc tacatacctg 361 tgacagacac taccaaccac ctcactgact gctgaccctg acagttcaca ctgccaatga 421 ggacacgtca gcggctgtcc ctcatagatg gcacagagca acgggtcagt aacggtggga 481 gcaggtaggt gctgccgtga ggtccgggta aaggcccatt ttaaaaagaa aatgccaaat 541 tgagataaaa atcaagggta taagtccaca gcagcaagct gtgcccacaa ctcagtacgg 601 agacgttaag acatgattca aatccctttc tcaatctgca cagccctgag gtcatcctgc 661 aaagtgcgta tc //