LOCUS BG070072 619 bp mRNA linear EST 12-MAY-2010 DEFINITION H3082D11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3082D11 3', mRNA sequence. ACCESSION BG070072 VERSION BG070072.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 619) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070072.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3082 row: D column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..619 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3082D11-3" /db_xref="taxon:10090" /clone="H3082D11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 168 a 162 c 161 g 128 t ORIGIN 1 gtccctcagg ttcactttaa tatgctttta gagttcaaca caaatatgga gcacagttaa 61 ccggaggggc aggacaaaga acactgtgcc cccttcagct aatcccagag tacctgacct 121 ccagccccaa acccatccag acatcacaag aatgcagtcc cagcccaagg caactgagtt 181 gctgcaggcc agcaggacct cctgactcca tgaagaacag agctgtttgg caggtctgtc 241 tgtggcagga ggggagggcg cagttcccca gcctgggaag ggagacagac tcgggtttcc 301 atgccgagag gtccggatca tagcagcatg gaggcagagg aatcatagca gctctggcca 361 cctggatctc agaacttaat tcaagtgggg tgccatatgt gatgggtgtc tgtgatggag 421 aaacgaagcc agggccatgg ggagatttat tcaagtgccc agggtcgagg ctgattaggg 481 caaagctcta gtccacctaa tgagggtaca tagatctaac attgctacca ctttgaccac 541 aacagcctaa catactgcac cacattctat aatcacatcg aactctgtat tgctgagtac 601 ctgccctcag cagtacagc //