LOCUS BG069964 710 bp mRNA linear EST 12-MAY-2010 DEFINITION H3083B01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3083B01 3', mRNA sequence. ACCESSION BG069964 VERSION BG069964.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 710) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069964.1. Other_ESTs: H3083B01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3083 row: B column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..710 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3083B01-3" /db_xref="taxon:10090" /clone="H3083B01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 222 a 151 c 144 g 193 t ORIGIN 1 aatgggcatc accgtttatt gtcgattgtg ttgggaactg aacagagcac aggctgtgga 61 gcagaggaga aaggaaaaga ggaggaagtc tgtttctgaa gagttcattt ctttaaaaca 121 ctttatggtt tcaaatcctt tctcacccca aagggaactc aagaattcaa gtatgttgcg 181 tagggagcgg taatacagag agggcttctg ctcgcgtgcg cctaggtggt gttgtcgggc 241 catgtaaaca agcagacaga tttccacatt tcttgcaccc tttttttttt gttttttttg 301 ttttttgttt ctttgctttg gtaaggtcaa accccaaaag gacacagcat ataaaagaac 361 cccgggctga ggaacttatc ctcagagggt aaccgcatag ttggaattgt cacataggat 421 taaaacaaaa caacaaaaca acaaaaaacc aaacacaccc ctcacctccc ccgagcccca 481 cgagtcacag gagtcctgat ccactccagc cagctgctgc tgcacctgtc cctcaggatc 541 ttaactgagg gttgctagaa ggaccaggct cacagggttc tcttcatttt gtttataata 601 aaaaaattta aaagggctat ttcaaaagaa aaaaaactga aattcaaatt ctgaaaatat 661 cttgcctttt ttattaatca tgtcatctaa caccaattaa aaaaacaagt //