LOCUS BG069954 663 bp mRNA linear EST 12-MAY-2010 DEFINITION H3083A02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3083A02 3', mRNA sequence. ACCESSION BG069954 VERSION BG069954.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 663) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069954.1. Other_ESTs: H3083A02-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3083 row: A column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..663 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3083A02-3" /db_xref="taxon:10090" /clone="H3083A02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 232 a 130 c 123 g 178 t ORIGIN 1 ctttctttct ttctttcttt ctttcatata tacagaatat tcctattaaa gtattagact 61 tagaaaaaat attttccttt tctatttaaa tcaaatactg ctcgacctac ttaccatagt 121 aacctttctt acctaacatg tgaatgtcaa ttaagaatac tgtttactat gttgttatgg 181 agagaattac ataaaatagg ataattaagt agggaggatg gaagaaaagg ataaagaagg 241 aaatctggag agggattcct aacactaaga gccatttgaa tccatataga aagctactac 301 tgcagaagct tcctcaaaca tatacatata tgaaaggaat ctaaacggag tcaccaaata 361 atcggggaga caataccaca tcttatgcca caatgtaaaa tctccaatgc caggaatggg 421 ttacatcttg ttcaactgtt ggtcaaagga gctccatgga aaccctattg ctgaagacaa 481 cattcacaga taccatagac cactgagaag tagagctggt gcctacctag agccttcgct 541 acaagtgacc actgctcacg ggactggaag gtacactgca tgctagcaga cgagaaagga 601 aatcagcatc tcccagctac aatgtactgg cacgatgggg acacaaatgt tatggaataa 661 cca //