LOCUS BG069881 620 bp mRNA linear EST 12-MAY-2010 DEFINITION H3081B05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3081B05 3', mRNA sequence. ACCESSION BG069881 VERSION BG069881.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 620) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069881.1. Other_ESTs: H3081B05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3081 row: B column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..620 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3081B05-3" /db_xref="taxon:10090" /clone="H3081B05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 240 a 117 c 102 g 161 t ORIGIN 1 gtacataatc atatagaata taccaaattc cagcacagga caaggtgact ccaggctggt 61 gccctcaatg gtttttcaca ttacagggac taagttggac aagcctgcaa aggcaagggt 121 gaatgatatt gaaacactgg ctacaaaact tactagcttg tgaagtttcc tacttctcac 181 ctcttgcagg caggcagagc aggtatatat ttaaaacaaa gtatctaagg gagatggtaa 241 aaagaaaata acaccaaaac ctccccaatt ctaaggtgct ctgtgtaaag ctgcaatgtg 301 aacagtgaaa aagaaatgta caattggctc caagtcatgc cgcactgttt atgaactcat 361 acacagtctt tctataaccc acctaaaaac ggtagaaaaa acaagaaaaa caaaaaccaa 421 aaccaagaaa aaaaccccca cagaatcctc atttatttta tgttattaga tgtatgactg 481 gccttagact ttgatgtaaa tggttaaaaa aaaaaacttt tgaaatttaa atatacaagt 541 agtattccca aattatttta aaacacacaa caaaacattc ctttttagta gtattgagtt 601 ttagaagcaa ataaccagtt //