LOCUS BG069862 759 bp mRNA linear EST 12-MAY-2010 DEFINITION H3080H10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3080H10 3', mRNA sequence. ACCESSION BG069862 VERSION BG069862.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 759) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069862.1. Other_ESTs: H3080H10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3080 row: H column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..759 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3080H10-3" /db_xref="taxon:10090" /clone="H3080H10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 248 a 167 c 149 g 195 t ORIGIN 1 gttacatcag tagctttatt acaacacaca ctgacacaat cagagaagga atgtcctggc 61 atttcatgga aagcaaagga accatctagg cagtagtcat ccatattttt tttccccaaa 121 caaaaagcaa gccttcccat gcgataactc agggaaacag tcttcttagt cctgtctgga 181 aaatatcagc taaagaaaac agctgttgta acataagccg agaagggaag ttttccttca 241 agatgtccaa atcctacctt tcgtccaaca gcctaaatgg ctgtaaggat actccaggag 301 gtgatgcggt tggggactac atggggtctg cttttaaggc caatgattac gtcaccacaa 361 ttgaaaggaa aggataagct gaaaaagtaa gtcctatata atgctctttc catttcattt 421 gaaaggttaa tgttaccata acattttaat tctatcagag atcactgaca aagcacgtta 481 ctgtatcttc aaaaggaccc cgcttttgca ccggcttggg agcagaccat ctatggagaa 541 aagattcagt gaccctgggg agcaggcact aggctgcctg gagtccacag gcagttctgg 601 atccaccatg taaacgacag aaggaacctt gacaatctcc cctcaacaat cctgtaacag 661 tcaggtgttt aaattccttc agtgcccaaa tgtacaaaag caacctaaga caaaattatt 721 atggcatttt gaataaactt gctaacatat tacataact //