LOCUS BG069822 713 bp mRNA linear EST 12-MAY-2010 DEFINITION H3080E05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3080E05 3', mRNA sequence. ACCESSION BG069822 VERSION BG069822.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 713) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069822.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3080 row: E column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..713 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3080E05-3" /db_xref="taxon:10090" /clone="H3080E05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 199 a 143 c 152 g 219 t ORIGIN 1 gcgtgacttt ccatgtttat tttctgtagt ctgcagtcta actggaagac ctatgcatta 61 ggatctgtta ttagatatat ttgctggttc cttacctccc gcctgaaaca ttagaccgtg 121 agactctggc agcattcctt agctcacacc taaacacgat ttaagaagta actaagctgc 181 tgtttccagt gagtgaacgg aggtgggcac agctgtgcgt gtgagggtga ggggtgtttg 241 tctgcttctg ttccatctcc cccaaaagtg aacatggaag aagtttccaa aggctaaaat 301 tacagaacat acatatctca ttaacaaagc agtcaattcc ctttattttt aaaattttat 361 gtacacatat gaatgatctg tataatgtac attcaatata gaaagcttta tatatttgat 421 aatgtataga acatttcaca attacactaa tctcttacat aacatcttca catccatttt 481 tagttttaat ttttttgcac aagctccttg tcgttcagtt tggtgacgcc tgtcatacac 541 accgatgtgc accgagctct cagagttaat gattgaggat ctggtcacgg gtggagggac 601 gatgagagga agacggtcat ggagacctgg tgcaggagag agaggcgccc tgctctggga 661 taagatttag cccaatgttt gtagactgca gcttaatccc acagtcacag taa //