LOCUS BG069809 831 bp mRNA linear EST 12-MAY-2010
DEFINITION H3080D04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3080D04 3', mRNA sequence.
ACCESSION BG069809
VERSION BG069809.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 831)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG069809.1.
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3080 row: D column: 04
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..831
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3080D04-3"
/db_xref="taxon:10090"
/clone="H3080D04"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 246 a 194 c 173 g 218 t
ORIGIN
1 aaaaagttac caggtggaca tatcaatatt tattgaaata ctggaaaaaa aatccatttc
61 attgagaaat tcatggcaag aaccgacatg acaatgtgtg tttcactgat acagtaagaa
121 aacgtcaaca agtaaccaac ttcacactcg gaacaccgca tggatacaag tccaagagag
181 atgcagagga gccacagtcc aaagactcgg acgtcacaga ctgtctctct acagagacca
241 gctacgggaa acccggctca ggtgaagacc cttcgtcttt agtctgcctt tattaggaaa
301 tctcagaatc aatgaggcag ctggctaagt tgcaaactgg ctacctactg acatcagata
361 accggccagt tcccaaaggg ccccggatgc agggtaccat atagacacct gctcaaactg
421 cttctgtcct tggtatggat gtgactgtcg cctgtttctc taaccatgct cagggtaaaa
481 gctacaattt ttaggtggaa tagtcagtgg gggagtacta tatatttaaa ataaggaaac
541 atggattttt tttcaatgtc aaaaaccctc aaaatagcca tccttctagt cacattaaca
601 tccaggatag agctctctca ttaaccactg acatctccag tctctctcat gtgcctttaa
661 ccacttggtt tttagtcggg aggagcagcc ctgtccctgt ctggtttaag gctttggatc
721 tgagctttga ctgatgactt tttctcctcc ctagaaccat gaagataaca ctgagagtca
781 atcccaaccc agctagtgtg cgtccttctg tggatggata ttagaggcca t
//