LOCUS BG069801 686 bp mRNA linear EST 12-MAY-2010 DEFINITION H3080C08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3080C08 3', mRNA sequence. ACCESSION BG069801 VERSION BG069801.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 686) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069801.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3080 row: C column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..686 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3080C08-3" /db_xref="taxon:10090" /clone="H3080C08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 241 a 126 c 102 g 217 t ORIGIN 1 ccaagatcaa atatatacat ttttaataac tgaaatattt acataatgaa accatgtcaa 61 ggttgaacat taaaaacagt gttttggacg tcctctcaaa tgtttaaaaa aaaaaaaaga 121 caaaacaaaa accaaaaacc ctagtaactc aagctcacag tttcattatt ctaacaactc 181 agtctttatc tttttagtaa gcaaacatgg cagcagccac acctaatttc ttgacagagc 241 tgtttagaac ttggtacttt tcaaataaat tttgccccta gtgatcttct gaattactaa 301 taaagtccaa ggatttcttg tcatcaatat agttaaagct tgatgaccag taataaaatt 361 ttgtgagcag aaaattgtct tgaatgtgtc ttggatgatg catctttgga agaaagatgt 421 aaacattttt aactaccatg gtgaattaac tactattgtg ttttgtcaaa tctcttttgt 481 aaacttacct tattcacttc tttattggta cggggaatag aacccaggcc ctcgttcatg 541 ctaagcaagc atagctctct cactgaggtc atccccgtca taagaaagtg agctcctccc 601 cccaccttac acttctggaa ttgttttatt aaaatgaata tgccaaaatt aaatgaagac 661 aagttgaaaa tatattgagc aaaatg //