LOCUS BG069798 678 bp mRNA linear EST 12-MAY-2010 DEFINITION H3080C04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3080C04 3', mRNA sequence. ACCESSION BG069798 VERSION BG069798.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 678) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069798.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3080 row: C column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..678 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3080C04-3" /db_xref="taxon:10090" /clone="H3080C04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 237 a 134 c 103 g 204 t ORIGIN 1 aaagttgcct acattttaat gcaatttatt tattcattct ttcacaactt ggtacacaca 61 taatatacta aggactttaa atttttttat ttgaataaat ctgttatcat gaaaatattt 121 caagaatgat tgttctgaag caagtgacag ccttactata actgtatgag gaagcatcga 181 aggtaagcat ttgaaaatga aaataatctc ataaaaatca atacataata ccaaaacaat 241 caaaatgcaa caatatttac atgagtattg tgttacagcg cacatccatg tcttccttgt 301 tgtaagttta caaaaatctt gggatataca aaatgttgag tgctaccatc ccaccctcca 361 ccgcctcagg aggctgcaca gaaaatgagc ccttccatat aggaccaaag cagttctgga 421 gctgactcac ttataaacca caagacacca tgatcacata caaacacaga agcgacatac 481 ctgttttacc tttcaactga actgtggttc aattacttta agtaattgtg ggtgtgtttt 541 cacagactga cagtcctagc ctctgaaaca cttcagaggt gagcacgtgt gagcatgcta 601 ttctttcata cagcaaaagc cagcatttta attaaaaatt tttatttctg taatacagaa 661 tccctagagt ccaaataa //