LOCUS BG069771 796 bp mRNA linear EST 12-MAY-2010 DEFINITION H3079H11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3079H11 3', mRNA sequence. ACCESSION BG069771 VERSION BG069771.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 796) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069771.1. Other_ESTs: H3079H11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3079 row: H column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..796 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3079H11-3" /db_xref="taxon:10090" /clone="H3079H11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 179 a 204 c 157 g 256 t ORIGIN 1 acaaatagga ctttttattt gtcactatta aaaatctgga ttttacactg attcttggac 61 tggcggttca tatccgtcag ctcgctcaac cttagcgccc gtctcgtctc cagctgcttt 121 gccagagctg ccgccttccc catgcagctc catgagcttg cccaattcaa acttgggttt 181 cttcagcatt tttacttttc taacaaagac gtcatggaga ggataaatgg actggcaagc 241 cttttctatg tctttcccaa tgctgtctgg aatcagttta ttaactactt ccttcaagtc 301 attagtctgc acctctcggg tcatgatttc catcatcttc ttccggatct ggcggacttg 361 ctggtgctgc gcataggatg tctttcttat ctggttgttg cgtttcttag tgaagccaac 421 acagaaaagt cggagcaaat acccatcggt cgtcttgaca tcaacgtgag cttcgatcat 481 ggtctgccac ttcttgacca tggagcacat tttgtcccgg gtaagatcca taccatggaa 541 gttagtcaga cagtttttgc cctgaacgtc ctcagtgatt agcttgaatt ttctaaacgc 601 aacttcatca ttctgtagat cagcaaggct cacttcaaac acacgaccct tgaggccatc 661 agaggcaatt ttggttcctt gagtcctcgt gactagtgtc ttcccgatgt tcctaatatt 721 gaacatggct ggagctttca catcgtacca gtctttctta gaaaatggat cgaccacttt 781 cttcttagct cccttc //