LOCUS BG069761 707 bp mRNA linear EST 12-MAY-2010 DEFINITION H3079H01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3079H01 3', mRNA sequence. ACCESSION BG069761 VERSION BG069761.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 707) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069761.1. Other_ESTs: H3079H01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3079 row: H column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..707 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3079H01-3" /db_xref="taxon:10090" /clone="H3079H01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 190 a 166 c 127 g 224 t ORIGIN 1 caggctttca catatgcatt tattgtgggg caatagtctt ttccttacaa agaaagatac 61 acttctatga tcatcgtcct catgatgtgc actagtatac catcgccact tgataagaac 121 ttgaaattgc atttgttttt ctttcttata tagtcttttt cagaaagatt caccaagtag 181 accattggtt ttgaagtcaa aaataagtgt ttattcaaca cttcaatctc tttgtcattc 241 cagtcatgat agaagcgaac aggtttcttt tgatctataa cccaagactt gactttgcac 301 attatgtcat actcgggctt cagtttcttg tcgcctcccc tcacggccac cttctctagt 361 ttgtctagaa tgggcccaat catctcctcg tccttcagct ggagctcctc gtgaattatc 421 tctatgtctc ggatgggatc tacacttcct tcaacatgcg tgatatcatc gtcttcaaaa 481 gcacgtgtta gatgaaaaat cccatcacag gcactaatat gggataaaaa ggcattcccc 541 aagccctgcc cattgtgagc tccttttaca aggccagcaa tatccactac atttaggaaa 601 gcaggaatct tgcttgctgg tttatggtac tggcaaagaa agtcgaacct ctcatctggc 661 acaggcactc tgctctcatt aggatcaata gtacagaatg ggaagtt //