LOCUS BG069742 702 bp mRNA linear EST 12-MAY-2010 DEFINITION H3079F05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3079F05 3', mRNA sequence. ACCESSION BG069742 VERSION BG069742.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 702) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069742.1. Other_ESTs: H3079F05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3079 row: F column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..702 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3079F05-3" /db_xref="taxon:10090" /clone="H3079F05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 222 a 134 c 103 g 243 t ORIGIN 1 aagtaaaact ccaactttat tgaacaaagg aataaatggg cgttttcaag ttttcgcgtc 61 atggttattt ttaagccatc tgaaccatga tagtacttat caacacgatg tttgtctatt 121 tttgtccttt gtattttgtt taattttata ttcataagta tacttaaatc aattagcagt 181 atatggtaac acatggtaat aatggaacag ctctgtagta actttgcaca aatttgaatt 241 ttatgcaaaa attttgcttt attgtttaca ttactgggat ctaatgtcaa ctacagacaa 301 acacttctgt attctatctc ccagccagaa caaaagtctg tgacataaca ttttcattat 361 gcaagacttc ctttttacat tttcagtaag agtgccatat agccttttct gaaacgaaat 421 gtctggggtg ctaatgaagg aaacagttta ataagcttat ttatttaaat caaatcctcc 481 agtaagaaat ggagaatctg ctatctttac ttaaaaggcg gtgtaaatat ttatctgtca 541 aaactacata cccacatgaa caaatatgtg cagttcaaca acatcccctt actggaacac 601 gagcattcca catcacagtt cccatacgga cttttaaaag cctcaaaatt ccgtgtcttc 661 tctggcttgc ttctctctgg attctaccca cgctttatta at //