LOCUS BG069741 733 bp mRNA linear EST 12-MAY-2010 DEFINITION H3079F04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3079F04 3', mRNA sequence. ACCESSION BG069741 VERSION BG069741.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 733) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069741.1. Other_ESTs: H3079F04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3079 row: F column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..733 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3079F04-3" /db_xref="taxon:10090" /clone="H3079F04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 200 a 141 c 153 g 239 t ORIGIN 1 actatcaaat tttggagctt tattgcattc gtcacctata gatgaagata actgaaaggg 61 ttttgaaatg attttcaact agagagtgac agaattatca accaggttgc tgtaaaatcc 121 attttacgat tcactttgca gagttcaaat atgccttttg ccaatttttt gccagtgata 181 ttttaataaa ctccatctga tcggaaggaa atatccagaa cttcagatcg agtaaaagca 241 tgatgacatc agatatataa ctgttaaggc ctatgaacat ttagtggcag ttcttcccag 301 aagttcaaaa ggctgcatca tgcctgtgta ctaattgttc tctttccact ggtatctgtg 361 gaactgtcag ggctgttact ttttatggat gctaacaagc ctttgacttt ttcactcatc 421 ggctttttct tcttcttccg ggagagagat gtgtggcctg accccggtgg cagcaggagg 481 gcagccagtc cccagggttg cctactcgaa gaaaaaggct gattcttatc ttcctgttcc 541 aaaatccagg cactgtctct tgccagttcc acaaatttgt agctggctct gactgacatt 601 tttgcttatg ttgagagatg tttcaaaagg attctggatg tatagaggag aggaatcagg 661 cttgttttgt tccttccctg tcgaatgttt atggaatttt tattgaaagc gaaattgcca 721 aatactcaaa aaa //