LOCUS BG069726 735 bp mRNA linear EST 12-MAY-2010
DEFINITION H3079D11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3079D11 3', mRNA sequence.
ACCESSION BG069726
VERSION BG069726.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 735)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG069726.1.
Other_ESTs: H3079D11-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3079 row: D column: 11
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..735
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3079D11-3"
/db_xref="taxon:10090"
/clone="H3079D11"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 192 a 170 c 129 g 244 t
ORIGIN
1 ggcttggtgt tgatatctcc aaggaccatg atatcagaga agtctatccg gaatttactc
61 aataaagtag ccatcgctct ccggtcatgg tctattctgt ttatttttcc accaatgaat
121 actcggatct tacaatcttt ccactttttc ttggtagtca gaagataggg tatcgacaat
181 gtcaaacctc catcatcaaa aagccaccag acatctatag tattcttccc ttgttttttc
241 tgaaactgtg tgctagcttc aagaagcttt tggtcagcta catttaaagg cacaataggg
301 cctttggatt cttttttcaa cagtggctga gttggagtct tgccatcctc ttcctcatct
361 ttctgtgtaa tggatttttc accagatgat ttgcaagtat cttgatctga ctttttactg
421 taatccacat ttactaccac atccttggta ccaggtgatt tttcttgtga agataataat
481 tcttcctgac cttggaggtg tgatatatcc agtccttcct tcaggcggat aaccacaact
541 ccaaattgta tgtcaaaagc atcatgaaat aagtttatat acatatccac atccctcata
601 tcggcttgta accaatcttt cttaaatccc aggacaagtg tgtttggctt catacgacca
661 agtccagcag cctgcatcaa gtattgtgca ccttctcgca agtcatctgc gtgaaccgga
721 gcatagaaag ccttc
//