LOCUS BG069722 738 bp mRNA linear EST 12-MAY-2010 DEFINITION H3079D07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3079D07 3', mRNA sequence. ACCESSION BG069722 VERSION BG069722.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 738) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069722.1. Other_ESTs: H3079D07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3079 row: D column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..738 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3079D07-3" /db_xref="taxon:10090" /clone="H3079D07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 213 a 164 c 130 g 231 t ORIGIN 1 gaattttaat aaatttattg ttcctaagat gtagccactt aaaaggtaag tgcagtccac 61 caatgaagta tattgttatg ttgacttttg taaaaacaaa caaacaaaca aacaacaaaa 121 aaaacccaac aatggccagc tgtttttaga gtagtttatc agcactggag gacaaatcaa 181 aaatggtatg agatgtagag atttcttctg tggctatact ttcttattcc atgacacagc 241 tttcactctg taaaactttg tccccaaagg aactttaaat ctgttttgtg cctttttggc 301 ttgacagtat tccttttcca ttactttccc aaggacccag ggtcttctag atgcacctga 361 agctccctca cctggtttga gatccagggc aggaagagac tctgagtgca gaaaatataa 421 agtaggacta acagtaaaca atacataatt gtcgtgccgc tcatctagga tgatgagaac 481 caaatctccc acctgaaaat ctctaatggc tattttttca gaatgccttg aagagactga 541 ggacaaactc tgagacatca gtctttgatt taaccgcttg ttttcttctt ctttcaactg 601 caatgtccgt tctaggagca tgatcctctg cttctcttca gataacatgt tttcttggac 661 agacatcatg cttgtctcca ttgcggaatc cagtcttcct tcatctgccg tctccatgac 721 tgatctctct ggctcccc //