LOCUS BG069700 741 bp mRNA linear EST 12-MAY-2010 DEFINITION H3079B09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3079B09 3', mRNA sequence. ACCESSION BG069700 VERSION BG069700.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 741) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069700.1. Other_ESTs: H3079B09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3079 row: B column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..741 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3079B09-3" /db_xref="taxon:10090" /clone="H3079B09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 193 a 150 c 185 g 213 t ORIGIN 1 gattttttta aaatgttttg tttttattat tttttaaaat aaattcagtg ttcacatttc 61 tataaagaat taatgcagtt tcaggagacc tgcccttctt gagcaggaga acagtgcttt 121 tcccggcccg cctctaatct gactgtccac cctgatgctt caaggtgcct ggaaaagccg 181 taagcctgtg gaagaggtct gttcctggcc gggcctccca gccccgggct cagtaagctt 241 tggagaaagc agaggggaag actagcttac tgtgaaactt ttgctaaaaa atattcatac 301 acgacagtgt gtacgcctgt caggatgctg aggagaacaa gagcttggag acatcccgtc 361 caggctgtgc gtgggggggc agcgcctcac accggcctgt ccttggacgt ggggtgtggg 421 ggagtcctgg ctttcatctt gggcagagcc cggcttccta gttcatgttc aactccattc 481 tctaaaacct gtgccgagtc ttacactgcg cgggaagcac aaacgttcag cttgtatgca 541 aaaaggtaca aaaacaacta gaatataaaa gttttggtaa tataaggcca tctgttcaag 601 tccaccttgg aaacctgtaa cagatattta aatactacat gaaaaggcat ctttaatata 661 ctttttaaaa acatttgaag taattagcta agagtgagtg tgagtgtgtg tgtatgtgtg 721 tgtgtgtgcg tgtgtgtgtg t //