LOCUS BG069684 774 bp mRNA linear EST 12-MAY-2010 DEFINITION H3079A04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3079A04 3', mRNA sequence. ACCESSION BG069684 VERSION BG069684.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 774) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069684.1. Other_ESTs: H3079A04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3079 row: A column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..774 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3079A04-3" /db_xref="taxon:10090" /clone="H3079A04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 199 a 186 c 184 g 205 t ORIGIN 1 gggctttaga aataaaacca cacttttttg gtttgctttt ggagacagga tttctctgtg 61 tatcactggc tgtcatcaaa ctcagagatc tgtctgcctc tgcctcctga gtgctgggtt 121 taaaggcatg tgtcattgca cctggctaaa aaccggaaag tagttgttct taggctcaaa 181 gttagagctc cttgaatccc cagactgtcc atcatcaaca agccgctgtc tacagatgtc 241 ttcttacaaa agccccgaat gtgaagaact ttctgtggcg tggggaatgg gcacatgttg 301 gctggagcgg agtgctagag gcttgctgta tttgcactga atccagacgc ggtacatggt 361 cagctgtttc cctcgattca cctgcaagcg gcgatccacc aggttctgca ccttctccag 421 gccagcagcg gtgaagagcg tatccagctc accttgtgtg aagaagtaaa ctctggtgcc 481 atcacctctc acatagaagt ttccagatag acactgacct ttcttaaacc gaagttgagc 541 catgtcatag cggccatagt ctcgaagaag catcacccct ccaggcttca ggagtcggct 601 tagcttgctg atcgctttct gcatcttgtc tggaacaatt gctgaaagaa caaatataag 661 aacgatgaca tcaagactgt cctcaggcac tgggtaactc tgatcttcat cacagagatc 721 atgaacaaag gcataacagc gagaaggatc atattgtgaa tttgtcttga gcag //