LOCUS BG069678 752 bp mRNA linear EST 12-MAY-2010 DEFINITION H3078H10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3078H10 3', mRNA sequence. ACCESSION BG069678 VERSION BG069678.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 752) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069678.1. Other_ESTs: H3078H10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3078 row: H column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..752 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3078H10-3" /db_xref="taxon:10090" /clone="H3078H10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 214 a 182 c 172 g 184 t ORIGIN 1 caaatagtta agagacttta ttctaacagc tataattaca atgcttgtcg aaatgaaaac 61 tgaaaacaag tatacaaaac agttgattac taattgtgta ttgaaagcgg taagaggttc 121 cacgacacca aataaaccag ttctgagatt tccccaagat aaatttaaca gctccagctt 181 cttcagtgtt tatcaaaata caaaagaaaa aagtagaggt cgtctttcga tggcaaatcg 241 gacccttgca ggctgaggga ggaagctact tcacacatgg agatgggggt gctccaggat 301 gtgggtctgt aatggaccga ccctcccacc ttgcacgcac tcctgctggt gagacccagg 361 cctcctgcca gcgcgtccaa gtgggcccaa gagtaggctg ggtatgcagg ctgccattgg 421 gccttgcaca caccaagtac aagccaggcc ctgcacccca caatggctcc cagcctaccc 481 taggtaaccg tgtgagcaca agtacaagca caatgctatg gaatgcaggt gacccaaaga 541 caggcgagtc acgggggctc tactgtgacc atgcagcgga tggtggtttg ttcatcacct 601 tctctcctgt tcccacagcg aaacaggtga tctgatatct agcattcagg ccattaactg 661 caaaacctac actaggcata gtctccgttc tgtgtgttca agtattcttg tcctgtattt 721 ttaactattt ttaaaaaatg cactgagttt gg //