LOCUS BG069587 783 bp mRNA linear EST 12-MAY-2010 DEFINITION H3078A01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3078A01 3', mRNA sequence. ACCESSION BG069587 VERSION BG069587.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 783) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069587.1. Other_ESTs: H3078A01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3078 row: A column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..783 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3078A01-3" /db_xref="taxon:10090" /clone="H3078A01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 229 a 137 c 201 g 216 t ORIGIN 1 gatttctgat aacattttat ttaaatcaac acaacaagaa tattgtcact tcaatatgta 61 atcaatgtaa aaatatcaat tgggggtatt ttatagtctc atttttccaa tattgtgtta 121 gtgttcattt gaactacagt ggatatttca cactttacag aatattgtag tttggactta 181 acactcttca agtgcccaat ggcagtgggt ggttgatggt tgacccgtcc agcaggtcca 241 gttattcgag gatctcgagg gggcctcctc ctaataacca aatggggggt agagagagac 301 gagggtcttg tacgaataac gacacggaga ccgttctgaa gttgtatcaa gaccccaatg 361 tattgagaaa ggtccaaggt ttaaatgcac aagcaaaggg ggaagtacag atacttatca 421 gtgggagggg tagggcaata caagcaaaag gggaagtaat tatcagtggg aggggtaggg 481 caatacaagc aaaaggagaa gtacttatgg gaaggggggc aatagaaatt ctttcttttg 541 gcagctacac cgggaagcag gaacttggtg ttatcagggt gtggtcagga caccggtgat 601 gacccagggc tggaacatcc cgtagttctt ggaatccatg tgtcggtggc ccgcttttga 661 ccctcttttc ttctcggggg gagaggccaa ttcagagatc aggacaatag cgttgcctaa 721 atggctccaa catctccccc gttttaatat ttttataaag gcatattgta taataaattt 781 gta //