LOCUS BG069480 715 bp mRNA linear EST 12-MAY-2010
DEFINITION H3076A04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3076A04 3', mRNA sequence.
ACCESSION BG069480
VERSION BG069480.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 715)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG069480.1.
Other_ESTs: H3076A04-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3076 row: A column: 04
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..715
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3076A04-3"
/db_xref="taxon:10090"
/clone="H3076A04"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 280 a 127 c 92 g 216 t
ORIGIN
1 ccaggtatca gttctctctt ttgtctcatt aattcattcc atcctccaag gagtgacagg
61 ggtggggtgg gggtgggggg tgtaaaacaa acaagccaat ccaaaacaag acaatccaaa
121 gttatgttat cttgagttac aactgtctgt ctagcacaat cagaccattt ccttttcata
181 aataatcata gagaatgaca tggttgagat atggagaaag gcattttcta agcaaatctg
241 aatttaaatc attctccaga tactatgtcc atcttttact ctaattattt ccactgacat
301 tacacacaca cacaaaaaaa ataaatcaac tgcttttact gttactaagt aatattaatt
361 ttacctctaa aaaagaatca gtaattattt ttaaagcatt acagtaatta aaattatttg
421 taaaattagt aacaattgaa aattctattt atgatcaatc cactataaac aaagccaatc
481 ttaaaaatac aatcctagaa aaagtacagt catgctaaga acagataagg aagccaagtc
541 actggctatg ctagaccaaa cagatcaaac acaaaactga ttttaaactg tatgcttata
601 taaacaaata aataaaaccc tacccttttt tcttgtatat atgcttaaaa tttcttacac
661 aaatataaaa aaattctttt ccttcaaaaa cttctgagaa aaaaagactg aaaag
//