LOCUS BG069395 822 bp mRNA linear EST 12-MAY-2010
DEFINITION H3076H04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3076H04 3', mRNA sequence.
ACCESSION BG069395
VERSION BG069395.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 822)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG069395.1.
Other_ESTs: H3076H04-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3076 row: H column: 04
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..822
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3076H04-3"
/db_xref="taxon:10090"
/clone="H3076H04"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 239 a 203 c 181 g 199 t
ORIGIN
1 catataagaa atggctttat tagaaaaaca tgtagtgtac acaggactaa cttctatcac
61 tggtatacag ctctgctatt ttgtaattaa agtctgacgc agggttctga tgtcttcaga
121 agttagcggc gtgagtccca tccctctgct gtgtgcctgg gaggggtcat cttcatagga
181 ccacccatgc ttcttgccgt agttcagctc atcagtgggt cagcacgggt acagtgcaca
241 tgggggtgac caactcgggc agtgcgtcct gtgtgagctg tcacagctcc acacaagagt
301 gccgccaaca cagctgtgct gtccacagag ttttcacatc ctcacgacac tcacgtcctg
361 cactattatt acctagtagt cattaaatta atgtgagact ctgtaactta acagaacctc
421 tgaaagaaat ctctttcttc gccttttctc ccattgcatg tgcacccaag caaaggtgca
481 ctactaaagt acggtccctt taaagtccta caagtctgtc ttcttaaacc gagacgacca
541 cgtcaaggta gagtctgtca taggattccc tgaagcacag aatcagaagg agactgagca
601 gacacgaccc aggaaggcac cagttgaacc aagacaactc tgtatgataa aatgtgacaa
661 aaaataaaag cactcccatg aacatattac ttaaaaaggt gacaactcca caggtgatcc
721 cttctggaac ggggtagacc gtttccacaa aaagctcaaa gaatatgggg acgctgctgt
781 tcaggaacac tccccagagg atgcaggagg catacaatgt ca
//