LOCUS BG069380 741 bp mRNA linear EST 12-MAY-2010 DEFINITION H3076G01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3076G01 3', mRNA sequence. ACCESSION BG069380 VERSION BG069380.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 741) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069380.1. Other_ESTs: H3076G01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3076 row: G column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..741 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3076G01-3" /db_xref="taxon:10090" /clone="H3076G01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 203 a 151 c 166 g 221 t ORIGIN 1 aggaaaaaag agcagtattt taatctcaag ggccccagac aactgagatg tgggggccat 61 tcccacagaa gtgagctgtg ttccctaata cagccagaga gatgtttgtt cagatacaac 121 aaacctagct ttgtaacacg caggtgggct tacgcacaca cgcacctcac tcacaacact 181 tcatatattt atccctgcct ttggttttct tgaatttcca catttgcagt caaagtttca 241 atacagtctt tttttctttt tgtctttttc ttctgcagtc cacagcagag caggtcctat 301 gcttgttagc tttaaagtct gttcatgtgt tagaactaca catttgtcct agagagatac 361 agattattgt tgtgactctc ccaggaagta cttcttacaa aaaatctgga aggtggagag 421 tgagtacctg cagccatatt tcagaggctg ttctgaaggg tctgtgagag caggctttcc 481 ctgggagatt cagcagctgt gacaggagtg gagatgggtg ctgcttctgg agggggagag 541 cctcatgcag aacagtgtgg aactcatcag aagttctttt atgtcaaagg tttctcagga 601 tccagcttta taaataaggc cgttgcctct gtgtataaag tcttctcatc aatactttga 661 atagtacagg aaacaaaaag tttccttcct tcaatttttt gaagttggct atttaccaca 721 acaacagaaa gaagggggat a //