LOCUS BG069379 722 bp mRNA linear EST 12-MAY-2010 DEFINITION H3076F12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3076F12 3', mRNA sequence. ACCESSION BG069379 VERSION BG069379.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 722) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069379.1. Other_ESTs: H3076F12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3076 row: F column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..722 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3076F12-3" /db_xref="taxon:10090" /clone="H3076F12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 162 a 201 c 194 g 165 t ORIGIN 1 atttttttaa aaaaaacata gccaagtggt ttctggggct ggagttcaca gctgagtttt 61 gtttgacagg agcacctttc tgtttgtctg tggacattgc cagccatgga ggaagctgct 121 gagaagctgt gcagatagcg ctcagcctgc ccagtatcag ggccaaggtg caacattttc 181 tagagtggag gatggccaag gaagggaaag gctttccttt ccctcgagaa ggatccctct 241 cctctaggat gacccgttgt ccatccagac ttgagatagg ggcaccaaga tccaggggct 301 ccttctcccc gctcagtctc accagcaggc tacccaggtc caggccatat ttggccacca 361 cgggccgcaa cacttccgtg actggcttgg tgggcttggc cttgagtccc actgaccggt 421 taatcggaac gagatccagc cgaaacaaag tccgcttttc caagcgtagg tccctggtgg 481 ccaggatgct gctgtcctga tgcagcacaa gaggcttgtc tccgcccacc aggaagaggt 541 ccacagcagc cccattgatg ccatgccgtt cacacaatcc agacagaatc tctttgatgg 601 agaacccgga cttgacagca accacacagg atgtcccgtc tgggacgtgg acacagcaat 661 gtttggcagc cttatctttc tcgagtgctg aggtcctaca ggcctctgac aggtctaggc 721 tc //