LOCUS BG069333 714 bp mRNA linear EST 12-MAY-2010 DEFINITION H3076B11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3076B11 3', mRNA sequence. ACCESSION BG069333 VERSION BG069333.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 714) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069333.1. Other_ESTs: H3076B11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3076 row: B column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..714 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3076B11-3" /db_xref="taxon:10090" /clone="H3076B11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 224 a 156 c 150 g 184 t ORIGIN 1 aaatcatctg tcagtggctc ctttcccacc aatgcacaat tggacctaca gtttttttct 61 ggttcacgat ctttcctttc atcttgttgg agtagaaatg gagtcacact ggggactagg 121 ggttcatttg ggggaggggg gttctcaggt agaccagctg agacaaagca cacacaagcc 181 aggacacgag ccagcagctc aaattagcag ataaagcaaa cagctttccc actgttcatc 241 actagagaaa gacgtttgct accccacctt caccacccct attcaataaa gctacataga 301 tggatctttc attcttttta acaagacttc caagtgttgg ttgggataaa atgtcctttc 361 cttcccctga cttgaaataa gtgtttgtgt cattgctgct ttacagtact ttgtcactga 421 acaacaggtg ccattatata gacggtccta cacgggtgtc tatgacacag acgtgcctgc 481 aggtcagaca ctatatatag gaccaccatg aaagtccatg ttccccaacg actatgggta 541 aagtaattcg tataggtgac agatggagtg agaacaaggg aacttaaaac taaataaact 601 aaataacagt accctgtatg aatcacaatg tacgaagact tccagtcatc tttagaaaaa 661 cataaatgta aaaacagaga aagggcgaac caatgaatta actgggacag gagg //