LOCUS BG069271 631 bp mRNA linear EST 12-MAY-2010 DEFINITION H3074E12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3074E12 3', mRNA sequence. ACCESSION BG069271 VERSION BG069271.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 631) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069271.1. Other_ESTs: H3074E12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3074 row: E column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..631 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3074E12-3" /db_xref="taxon:10090" /clone="H3074E12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 150 a 162 c 128 g 191 t ORIGIN 1 catggccttt gcacagcttt tattattaag ctatgagcat cctgtttgag gctagtttta 61 ctagcggcta tgtgcacatt tgtccgcaat caatgaatct acttgtcccc ctcccttcat 121 agtagcaggc tttgcttgtt tctctttgca catccttggc tttacagtac atctgaccat 181 agtgcacaac atgattccaa gtcaagacag tggcccactg ggcactgagc ttctgattgg 241 tgaagggcag tccaatcagt gctggtgtca tgggattacc caaaccatgt ccggccaaaa 301 tggcactacc cagcagtagt gaaccatcta cttaaacaag ccctcagggg aaaggctaca 361 ctggcagtca gtcttgagcc acatctttat ttggcgcccc atccaggtag atcttgagtg 421 ctttctcttt gcgaggggag tatgtcacac gatgtcccgt cttctgcagt cggctgcttt 481 cctttttcat caattcattt ctttgctcat ctgtcaattc catcacttct tctgttctat 541 ccctataaaa tatgacggca ccatcatcac agatataaag aggccaaaca ttcagggtag 601 agactttagg attccagtcc aaatcttgat g //