LOCUS BG069237 504 bp mRNA linear EST 26-JAN-2001 DEFINITION H3074C02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3074C02 3', mRNA sequence. ACCESSION BG069237 VERSION BG069237.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 504) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3074C02-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3074 row: C column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..504 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3074C02-3" /db_xref="taxon:10090" /clone="H3074C02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 187 a 70 c 86 g 161 t ORIGIN 1 aaaatgatag aatttatttt aatatgatat atgtattcac aaatactatt ttaaaaataa 61 gcatgtagat gataacaatt ataaaagata aatcagccct aatttaatgt tatcagagaa 121 gagagcaaat atagaagtca gtctaacatt gttgcatttg ccttttaaat cagaagaaac 181 acttagaaca atataatgta gccttttcag tgtcttgtta ccaggaatac ccctcttcta 241 acttagattc aaatcattaa aatctcttaa cagttatggg agtatgatga agtcacctaa 301 actgagtaat gagagatacg agccgaaatt aagaccctga ggaatgagaa tcggtttaca 361 caatagtttt ggttaagtgc aattctgtta cataaggact acttaatttt aaggtcatat 421 ttggtaaggc ataggaaaaa tgagatctac tacagtaaca atctagacta gctttaggtt 481 cttacgacag agttgttgtg tttc //