LOCUS BG069205 578 bp mRNA linear EST 12-MAY-2010 DEFINITION H3073H05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3073H05 3', mRNA sequence. ACCESSION BG069205 VERSION BG069205.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 578) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069205.1. Other_ESTs: H3073H05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3073 row: H column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..578 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3073H05-3" /db_xref="taxon:10090" /clone="H3073H05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 135 a 129 c 142 g 172 t ORIGIN 1 gggattaaag tcctttactt tttagcacca cattaaacga ttttacacat ccagtcactt 61 aatgaaatcc aacaaactct tcaagagtcc gggggatctg gtcttggtag ttaatgtcat 121 tagcccgaac tgctcgggca gccaggcact tgaggctcat cttcatctga gttttaagta 181 gtatttcaga caccccagtt gtacttttgt ctagcggagt tttattctgc ttgtttgtca 241 tgtcggtgtg agctccagcc tccacaaggc tgatgatgat ggagtgcaag gtcagaaaat 301 cactgatggg cctgttgtac tggacgataa tgtggagggc actgttcccc tcattgtcca 361 ctgcatttac ctcagcgcca cagtccagca ggagctttgt gaccagagcg ttgggaaagc 421 tgcagacatc gttagtatgg aaatcatcaa ctggtgtgtt cgagttgaca gccaggtgta 481 gcaaggaaaa accttcccgt gttctggggt ccaggtgaat caggttgtag atctgcttgt 541 taattctgca ctgatcttct tcgctacact gtgtcttg //