LOCUS BG069178 620 bp mRNA linear EST 12-MAY-2010
DEFINITION H3073E12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3073E12 3', mRNA sequence.
ACCESSION BG069178
VERSION BG069178.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 620)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG069178.1.
Other_ESTs: H3073E12-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3073 row: E column: 12
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..620
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3073E12-3"
/db_xref="taxon:10090"
/clone="H3073E12"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 220 a 127 c 117 g 156 t
ORIGIN
1 gagaaacatc cacttgacga tttgaaaaat gacgaaatca ctcaaaaagg tgaaaaatga
61 gaaatgcaca ctgtatacct gtgatcccag cacaggagac aaaggcagaa aatcaccaaa
121 ttgaggccag tctggaactt catagtgaaa cctcagcctc aaagaacaaa acaagggctc
181 aaaagacagc ttaggtgtta aaagcaccag ctgcataatg acagccagag ttcaaatcct
241 agcaccaaca ttaacaagcc agttctacgt aagtctgtaa ctccagctcc acgggatctg
301 atacattctt ctggcctcac caggatcact gacttttgca tatacaaacg tacagaccaa
361 aaaaaaataa atttctttta aaaatcctgt ataatttgat ttagttaacc aataaactct
421 attatacata ctatggatgg tagtaactgg cttctggtat atcttattaa tcatcgatgt
481 aaacttgtga atgcatgcat gtggaagtca gaggacaact ctgaagggag tgattgctca
541 ggtgttgtac aactaatttt gtgagatgat gcttctcaat ggcctgaaat tccccaagta
601 gactaggctt actaagcagc
//