LOCUS BG069083 668 bp mRNA linear EST 12-MAY-2010 DEFINITION H3072E09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3072E09 3', mRNA sequence. ACCESSION BG069083 VERSION BG069083.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 668) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069083.1. Other_ESTs: H3072E09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3072 row: E column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..668 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3072E09-3" /db_xref="taxon:10090" /clone="H3072E09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 221 a 124 c 135 g 188 t ORIGIN 1 aggtcaacaa tgtgcttgta cttttattat aaaagtaaaa taaaaaagta aatagcattt 61 ataaattcaa catttcttct tttaaagtat ttgatttaga aaacatattt acaatagtaa 121 aatgcataaa acggggaaaa tactattttc agcactgatt gtagcatgtt ttaaatattg 181 taagttcatg tgttttttat ttttaaatca cagataaacc acattaaaaa aagaaatgtc 241 ttttttttat tgcgcatcaa ggtactcatt taaaaatatg tttttcctta atcttaattt 301 gaatgcacaa cttacagtag atggctagaa aggacaccgg gtggggacag cgacaccttt 361 taatgacagc aggaacccag cggagggaca gcagtaacaa cacaaagcaa atgtgatcca 421 gtagcagcag agaaagctca agacactgca cctgagccat agagtgcagc tgagcgagcg 481 agcgccatga ttgctagaca ccgtctgtgc gtggcaacta catttcattt cagaaccaag 541 aaaggacgcc aaattcggaa ggccttgaat gaaatcgagt gaccctgcag gccggcgatt 601 ctccagcacc tttggattcg ctttgccttc ctcctttggg acgatgcaat ggactgtcag 661 ggctttgg //