LOCUS BG069048 696 bp mRNA linear EST 12-MAY-2010 DEFINITION H3072B08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3072B08 3', mRNA sequence. ACCESSION BG069048 VERSION BG069048.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 696) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069048.1. Other_ESTs: H3072B08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3072 row: B column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..696 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3072B08-3" /db_xref="taxon:10090" /clone="H3072B08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 234 a 146 c 136 g 180 t ORIGIN 1 aaaaaataaa tcttcaaaac caagaactta ttttccaaat aaacttgata atgttctgag 61 ctttacaaga aacatttagt aaatgattta caaatgtaac atttaatgtg gcaattactt 121 agtaaacatt tagtgactga ctcatgaatg tagcatttac tactagcaca tttacagaat 181 acacaataaa acagaaaaca acaataacat aataagaacc ctcctaaact ttggtacctt 241 tgccctcttc cgaagaagtt ttgctagtcg aaccacatat ggcttaaatt ctcgctgatg 301 tatgccctgc cttctgactt ctaagcccga gtcatctgaa gcttcaggaa taaaggccca 361 tcggtacatc tgaaactgag gaagattttc agagggcaat gccagagcca aatccaaaaa 421 cttgcaagca gagagataga ggtttaacca cctctggctg ttatatgatg tggagaagcc 481 attacctcca gtataggttg tctccagacc agcagcagac ggccctgacg tccgtgaaat 541 atcttcatca gcagtgagct cctgctccat cagtaagaac acctgcacaa gttctgtgat 601 catggtaggc cagagtgagg tgaggtgttg tggagacatt cttaaaagta acactctgaa 661 aaacaggaac acttgagagt gaagggtcgg cacctg //