LOCUS BG068995 598 bp mRNA linear EST 12-MAY-2010 DEFINITION H3071E11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3071E11 3', mRNA sequence. ACCESSION BG068995 VERSION BG068995.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 598) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068995.1. Other_ESTs: H3071E11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3071 row: E column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..598 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3071E11-3" /db_xref="taxon:10090" /clone="H3071E11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 170 a 92 c 135 g 201 t ORIGIN 1 atagtaagca ctaatcaatc tgcagttaac gctgtatcta atttctgaat cagatgccat 61 gaattactgc ccctgaatgt gtttgccaat aaaaggataa gttaaggctt ttaatcaatg 121 cttcttgcgc tcagtattta aggtcagagt ctggtgtgag acttattttg atctggataa 181 ttgttgggtt aaaaaatgaa tggtttttga aatcgtgaca ctgtggttga ctcttgagtg 241 aattaatctc tgagaaaatg gaaaactgtc aatttcatga gttctcttgc tctcgggttg 301 tccttcagat cacttatgga aaaatatgac ttttaagtgg aaggcattct ttctcattga 361 gaaaggaggt aagagactga tacacatttt tgaaggcctt aacactggag gagctgaagg 421 ggaaccagag aagaagtagg gatttctcag attgtcagtg agcattgagt ctctgctctt 481 tatgttttag gtgatagtat aaccttgtaa tgttgtgtct ttggtatatc tttctcatag 541 taagctcagc ttcctgacca agttccctgt gttgcttgga atcaacagaa tgtagaaa //