LOCUS BG068971 678 bp mRNA linear EST 12-MAY-2010 DEFINITION H3071C09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3071C09 3', mRNA sequence. ACCESSION BG068971 VERSION BG068971.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 678) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068971.1. Other_ESTs: H3071C09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3071 row: C column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..678 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3071C09-3" /db_xref="taxon:10090" /clone="H3071C09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 183 a 143 c 109 g 243 t ORIGIN 1 aattattatt gttgttttaa gtttgagggg gaagcgtttc ttcctttgag tgtagcttac 61 caaagcctac tgtcatatca cagaaatgaa cagaagtaaa tactgcaaga tactaatgaa 121 gcttattgtg acggaaagat tataatcctg tttctttatt atgctttttt ctgaattttc 181 caaattgctt tactttcaaa acatttcaag cacacagagg ttttaaaagt ctaatgtgca 241 ctcattcaga cccttcactt tgataagtct gttgttagtg tctggcctga cactgtgcct 301 actgtggatg tattcatgcc taactcctaa cctttttgtg gaagcacctg tggattctat 361 agtttcactc ctgaattctt gaactcattt cagctaagca tagaatctcc attcatatga 421 ccaaccatcc ccttcctctt ccaccccgtc ccagtcctac acatattctt tggtggggtt 481 ggggaatgaa taaaggacag tgccgtgtgc taagtctttc accctaacta tatattaaac 541 tcagaaaact taacattgac cttttaataa tctttttatt attcatttgt ctctaaccaa 601 agttctaatc caaggacaca ttctacattt ggctttgaag tctcctgatc tgaatcagat 661 ttgcagcttc tctgtttt //