LOCUS BG068943 627 bp mRNA linear EST 12-MAY-2010 DEFINITION H3071A04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3071A04 3', mRNA sequence. ACCESSION BG068943 VERSION BG068943.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 627) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068943.1. Other_ESTs: H3071A04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3071 row: A column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..627 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3071A04-3" /db_xref="taxon:10090" /clone="H3071A04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 193 a 121 c 131 g 182 t ORIGIN 1 aaacacacac tttatttcta cagctttaaa aattgtgtct aggaaatgtg ggattcatga 61 gaagacatta tttttctaag agtgaatgat cacagaaaat tctgtaataa cctgctctaa 121 ataaatacac tgtctttaat tgtgcttatc acagagacat tgaattattt ttctgtcttt 181 gtggaattta aattgtaagc atacattgtg tacaatattc aagaatgcac ttaaacatca 241 aaaaaaaaaa aaaaagccac ccagaactga actggctggt tttgtatcaa cttgacacag 301 ctggagttat tacaggtaaa ggaacttcag gtgaggaaat gcctccgtgg gatccagcat 361 aaggcatttt ctcaattagt gatcaaggtg ggagggccct ttgtaggtag taccatctct 421 gggctggtag tcttgggctc tataagagag cagactgagc aagccagggg aggcaagcca 481 gtaaagaaca tccctccatg gcctctgcat cagctcctgc ttcctggcct gcttgagttc 541 cagtcctaac ttcgttaagt gatgaacagc aatgtggaag tgtaagttga ataaaccctt 601 ccctcaccaa tttgcttctt ggtcatg //