LOCUS BG068772 714 bp mRNA linear EST 26-JAN-2001
DEFINITION H3069B07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3069B07 3', mRNA sequence.
ACCESSION BG068772
VERSION BG068772.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 714)
AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A.,
Tanaka,T.S., Carter,M.G. and Ko,M.S.H.
TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set
JOURNAL Unpublished
COMMENT Other_ESTs: H3069B07-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3069 row: B column: 07
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..714
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3069B07-3"
/db_xref="taxon:10090"
/clone="H3069B07"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 234 a 150 c 119 g 211 t
ORIGIN
1 aatactgaaa acgccattta cagcaatttt attggtctta ctgttcttag agggttcttc
61 caaaaacaag ctatatttaa taggattaaa taaatccaaa taattacatt tcaactgaga
121 ttataaaaaa taacatcaac aatccttcgc actggagagg tttgggtacc cacgcgtagg
181 tccctttatt ctgtctgtca gtaaaggcag ataccatccc ttgctaagct caacccccag
241 tgtcccctgc gctgcagttg cccacagcac cgtactgaca ggacaaacac tttgtcagtg
301 attttgtgtg gagtacaatc ctggcggcct tcgggggcat cagtgaggac atcatagtga
361 ggttaaacac atctatcatc accttgctca tctctgagac gcaactgacc tagaaaaaac
421 ctgctctagc ctgcttacac cctctttgca gattaacagt cccgtgtgac actacaaact
481 taacttggga aagaaataaa gttggataag ttttgttttt aaattttaac aatataaaag
541 tcataataca acatttcatg cctatattta aggttattca ggttctaaag gaaataatag
601 aaattacaaa atattctcgc ctttattaca aagaaaacct ctacaaatgt tatttatatt
661 aaagctatag tgttagaatt gcaaaatgcc ctacaccagg tcataagatt cttg
//