LOCUS BG068667 615 bp mRNA linear EST 12-MAY-2010 DEFINITION H3068A09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3068A09 3', mRNA sequence. ACCESSION BG068667 VERSION BG068667.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 615) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068667.1. Other_ESTs: H3068A09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3068 row: A column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..615 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3068A09-3" /db_xref="taxon:10090" /clone="H3068A09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 210 a 105 c 136 g 164 t ORIGIN 1 gtctgcatgc atgactgtcc accatatgta tgctagagga ggccagaagg ccttggatcc 61 cctggaactg gagttacaga cagctgtgag taaatctgtg ggtgttggga attgaaccca 121 ggttctctaa aagagcatcc agtgctttta actgctgagc tgtctttcta gcccttcatt 181 ttgctagtat acaaatttac ttatgccttt aataaatggt ataactatag gtatataaaa 241 ttgttttaaa ctaaatttat gagtcattat cagtaaatgt ttgtcttgta taccattacc 301 tgtgatcaca taaaactgtc ttggtgaaaa gagactgtgg ggaattttta agacattctg 361 acctaggggt tgaggaggtg gggaaagagc ttggggtact agcatgagac ctgaggtcag 421 agtctcagaa caaggcaaaa acaagagaca aaaaaggcac tggaaccatg acttgagcga 481 taattacctg ctcaggatca caggaagaga acacgataaa aacatattac acaaatggaa 541 gaaattctga actaacgaaa caaacaatta aaaaggaatc gcacagagat tctaatgtgt 601 catttaaaaa ccaac //