LOCUS BG068665 789 bp mRNA linear EST 12-MAY-2010 DEFINITION H3068A07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3068A07 3', mRNA sequence. ACCESSION BG068665 VERSION BG068665.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 789) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068665.1. Other_ESTs: H3068A07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3068 row: A column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..789 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3068A07-3" /db_xref="taxon:10090" /clone="H3068A07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 233 a 148 c 140 g 268 t ORIGIN 1 acaagtgtta cttcttacaa gttttagctc ctccttcttc cttatttcct cctgttctct 61 gaaattcatt ctggactgtg cagcttaaat gtttcataaa tatccaatct gacagttaat 121 ttcactatag agagtttact tatttgtttg tttgttctac taaacaatat tatgtagctt 181 tgttgtcctc aattctcatt ttgtagccag tgatgacctt ggacctttgt tcctcttccc 241 tttccatcct gagtaatatc agcattccag gactatagct ccacgtcctg tttacttaag 301 gctagggatt aaacttgggg atttctgagt atgatgaaac cctctactac ctttactgac 361 tgagctacat gtccagccca ttacatcaca tttagctttt attaataagt ctatgtgtat 421 cagatcagtc atagatacaa atctaaagaa actctatagg tcaacaaata tagtccagat 481 caatgtatat ctgcattttc aaatgcagag ctactattaa ataacaatca tctagaaaac 541 agaagtatag ccaaagtagg acacaaattt caggtgttgt cagtggaaac taagaaggca 601 tcaagaggag tataggcatc tgtgagatgc tgagttcagg atggttcaag aaccttttta 661 gctaatcagt gagcttgctc atgtgtactt ttgtgcttga tacatgggtt ggtataagtc 721 aattaaatat gagaggacct aggtattgct ttgagctaca ctgaaatcaa taaattcaga 781 gcataggag //