LOCUS BG068448 744 bp mRNA linear EST 26-JAN-2001
DEFINITION H3065F04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3065F04 3', mRNA sequence.
ACCESSION BG068448
VERSION BG068448.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 744)
AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A.,
Tanaka,T.S., Carter,M.G. and Ko,M.S.H.
TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set
JOURNAL Unpublished
COMMENT Other_ESTs: H3065F04-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3065 row: F column: 04
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..744
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3065F04-3"
/db_xref="taxon:10090"
/clone="H3065F04"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 289 a 155 c 136 g 164 t
ORIGIN
1 ggacaaagat gccaaaacca tacggtggaa aaaagaaagc atccttaaca aatggtgctg
61 gtgtaactag atatctgcat atagaacact gcaaatacat ccatatctat taccctgcac
121 aaaactcaag tccaagtgga tcaaagacct cacacaaaac ctgatacatt aagtttaatg
181 gaagataaag tggggaatcg ctttgaatgc attggtacag ggcctaactt gtttaacaga
241 acaccaatag ctcaggccct aataccaaca attaataaat gaaacctcag aaactgaaaa
301 gtttctgtaa ggcagagggc actgtcaatc ggaaaaagca gcaatctaca gactgggaaa
361 gatctttacc aaccttacat ttgacagaag gttaatatgc aaaatatata aagaactcaa
421 gaaattaaac actaccaaac caaataaccc aattcaataa tggatcacag agctgaacag
481 aattctcaac aaagaaatct ctaatggtca agaagcactt aaagaaatgt tcaacatctt
541 tagtcatcat agaaatacaa atcagaacaa ctccgagatt ccaccttaca ccaatcagaa
601 tgactaaggt caagagacgt gacagcacat gctgatgcag atgtggagaa gtggaaccta
661 ctccattgct aggggagtgc agcctttaca accacactgc aagtcaatct ggcagtttct
721 caggagactt gggatagttc tgca
//