LOCUS BG068296 631 bp mRNA linear EST 12-MAY-2010 DEFINITION H3063H06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3063H06 3', mRNA sequence. ACCESSION BG068296 VERSION BG068296.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 631) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068296.1. Other_ESTs: H3063H06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3063 row: H column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..631 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3063H06-3" /db_xref="taxon:10090" /clone="H3063H06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 183 a 132 c 146 g 170 t ORIGIN 1 gcattgtatg tattatagaa gttagaaaca aacacctgga tcaattgtaa acataatcct 61 gaagtacagt attttccata ggacaaaaca cagcaagaca ttttctactt agacaggcaa 121 ctttttgaaa tagagcttat tcatactgaa aatgttggaa caaaacacag gacacagtac 181 taatctgtca gacatactat gaaatgcata gtctccatta aatgctgaat gacacacaca 241 tttttgcaag cattactgct ttccacaaaa actgctgaat ataagtcggt ccctgccaag 301 atcagtgtta atagctattt tgtgatgcta agtactttgc tgttggtgat gttgggaaag 361 tttgtcactc catgcagata gatgtctgag atctcattcc caatccatgg accatgggtg 421 gagaccagct ccccctctgc tttagatcat cacatagttc tgagtggaga cgtgttcctc 481 cacctgcaag tcctgtagga gctgctgctg ctgagatggc tgctgggcag agggctccag 541 ggagtcggct gtgctggtgt catcagagag agatgtgaag gaaacccggg aggaaagctg 601 ctctacggtc agtgttgcca gagccgagct c //