LOCUS BG068252 819 bp mRNA linear EST 12-MAY-2010 DEFINITION H3063D07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3063D07 3', mRNA sequence. ACCESSION BG068252 VERSION BG068252.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 819) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068252.1. Other_ESTs: H3063D07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3063 row: D column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..819 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3063D07-3" /db_xref="taxon:10090" /clone="H3063D07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 227 a 201 c 179 g 212 t ORIGIN 1 aataatggag ttgaacatac tgtttgcagt gacacgagag tctacaaaat acctatgttg 61 taggttgttc ttttcattct accactgata gttacacact gctgtgcaga catgccagtg 121 tgaagaggct gaggaagagt tggaattaac aaaagagggc acttcttctg aggcctgcaa 181 atgagctctg gagtcattca ttcttcagtt ccagcggaat gaaatatgcc gagggcggtc 241 accaccttcc ttcaccaggg gcttgtggaa ttctctgcca gcacgagagt gaatagcagc 301 ccagcaatat tcacagtaat actgcagaca ggtaacatta gcacagaaaa atggagcaaa 361 tttcccccca caacgggccc cttgacattc atcacacagc tggtcatcca agacatatgg 421 cttaacctcc acccgtttat ctatctctcc atgctgcagc tgaacaaagc gggcactgat 481 agcagctatg taactctgtt gattagaaaa cgcgactctt ccagctcctt ttgggtattt 541 gagctctggg tcagtatcga ttccagcata gcagacgcct ccatacagcc gatccattat 601 cattgcaagc tccacagctc gtaatggtcg aggaacacca ccaacaaata ttgttttccg 661 tgggtcaagt ggctgtgagc atccatcaca aagtcactgt cactgagatt ccagggccgg 721 atctgcactg gtttatcctt gatggttgga cttgatacac acaggtaaag ttttccatct 781 tcttcaatac atgcatcaat gagagcctga acagaactt //