LOCUS BG068236 697 bp mRNA linear EST 12-MAY-2010 DEFINITION H3063C01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3063C01 3', mRNA sequence. ACCESSION BG068236 VERSION BG068236.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 697) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068236.1. Other_ESTs: H3063C01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3063 row: C column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..697 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3063C01-3" /db_xref="taxon:10090" /clone="H3063C01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 176 a 139 c 166 g 216 t ORIGIN 1 agttttatgc tgggtttgta ttctaagcag tccagacact ggcttgatgg gatcacttgt 61 caaatcctca gaccatcaag ggtgtcggtt tcttagatgt acgaccataa gtaaatcatt 121 tgactgtctg cttgctcttc attctttttg tactcaagta gagagaaatt gggtagagta 181 gcgcatgtct gtaattccag gccttgcatg cagaaaccgg gtgaccagga gttcacaatc 241 atcctctagt acacagtgag ttcacagtaa gcctgggctg cacgaaaccc tgtctttaaa 301 agaaaaagat gatagaaacg ggtctgctgc cttgcttact tcatgggatg ctggcagtgc 361 tgttgataag tgggctgtgc acccttagga agccaagagg ttattattat agaccctggc 421 cttaaaatag atgtttgacc aacaggctca gtgctcgttt gttgtgcttg gtgaactttg 481 ccaatgtata tggggttttc tgtatctttc tgtcagttgc ccacctttta gttttgagcc 541 taccctttac ctattcgaat catttgctat cttagaaacc tgacaatcaa acaggctgtt 601 gaggcaaata gtaagcgcac aattagagag cccgagatgc tcatgcaggt tttcaacttg 661 ggataaatga gttcttttga cctgtggtag gagtgta //