LOCUS BG068041 656 bp mRNA linear EST 12-MAY-2010 DEFINITION H3061B02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3061B02 3', mRNA sequence. ACCESSION BG068041 VERSION BG068041.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 656) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068041.1. Other_ESTs: H3061B02-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3061 row: B column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..656 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3061B02-3" /db_xref="taxon:10090" /clone="H3061B02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 212 a 134 c 106 g 204 t ORIGIN 1 aacaaaataa aagtttattt tattagaatt aggaatgttc tttccctctg ggcaacctga 61 acagtccagt tacaatgaaa atctaagaac agttatttcc acagcacaag gtgctctatg 121 cacaaaatta cagggttagg agcatttaat caatttatcg atctgattgt ctcaccaacc 181 caccccatcc catcccccaa gtgctctata ccggacatag ctaaaagaat ttgttacatt 241 taagcctttt actcttcttg ctctaaattt caagtcctac ttaacaggtg aaccacacat 301 tacactgcag attcaaccat ttcaaatcaa gtcagtcttg gatctatttg tgtgtatgta 361 tacacgtgtg tctttaatat atttatttga acacacataa aacatataca atctgggttg 421 cagcaaatta caaagaattt agagtctggt aatgttatat gctactccat ttaccactat 481 ggtatgtctc ctgagctttg gatcaaaatt ttattgtaaa tcattgaaaa ttcacctgtt 541 gctcaatgaa ttgctcaaat gaagcatgca ctgacaatgt aactgatctc aacaacacag 601 ggagaccctg atgtttaagt agagccctct gagagacttg ggtaggtcaa ataggg //