LOCUS BG067990 638 bp mRNA linear EST 12-MAY-2010 DEFINITION H3060E07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3060E07 3', mRNA sequence. ACCESSION BG067990 VERSION BG067990.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 638) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067990.1. Other_ESTs: H3060E07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3060 row: E column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..638 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3060E07-3" /db_xref="taxon:10090" /clone="H3060E07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 219 a 135 c 132 g 152 t ORIGIN 1 aaaggctttt attgtcctga atcctgatta caagtcccat gatcaagagc aactgaaaaa 61 ggagatccag gagcacgtga agaagactac agcgccttac aaatacccca gaaaggtagg 121 cgtccctggt accagtgatg tcagtccagt gctttggaca gttttctcct cagatatact 181 atgcgagagg tttcaaacag agctaatgac aatagttaat caaaaactcc gaggctaaac 241 cgaagccccc aacataattc agtcaattag ctcataattt taatgtaaaa aacaaaaaga 301 acaaaaccta actttatcct ttcacctaga gtttgacaca gagctcttga gtaaccggca 361 tgacctgaag gaagtgaaca agtgctggac taacctcttc ctgcccttac taccaacagg 421 tagaatttat tgaagagctg ccgaagactg tcagtgggaa ggtcaaaaga aatgaactga 481 ggaaaaagga atgggtaaca acttgaactc ctcccactaa tcacctgtgt agctataaac 541 acagtgtcta caagtctgca ggaaccacag attatgtggg cagactgctt tgaaactgga 601 ttgaaagtat tttgtagtta tgacatcaga gcctgaat //