LOCUS BG067961 656 bp mRNA linear EST 12-MAY-2010
DEFINITION H3060B09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3060B09 3', mRNA sequence.
ACCESSION BG067961
VERSION BG067961.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 656)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG067961.1.
Other_ESTs: H3060B09-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3060 row: B column: 09
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..656
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3060B09-3"
/db_xref="taxon:10090"
/clone="H3060B09"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 222 a 146 c 87 g 201 t
ORIGIN
1 accctatcct tttttaattt tagtatactg gtttttttaa aaaatataaa acaacatcat
61 ttatctatac tatcccatca gaaattccaa tttcacttaa agtttttttt tccttaagcc
121 tactcacaat gaatatctat gtatgtgaaa accccaagat tacacgtgta attactttct
181 cccttggcat aacataagta aaatacataa tatgggcagt taaatacttt tttcccaaac
241 attaggggtc atgatatata taaagattaa tttcttatgc attatcccta atgtaaaaaa
301 caaaatcaca ggtatattat actgcttgtc aaaactccgg tagtcacacc tggacactac
361 acgtccctgc tgaggctttg tgtccaccat cagtatttct gcacgagccc ttacaaccat
421 ctggagttgg aaaccaattc ccgttaaggc aaccctgtat gaaactgtcg taaaatattc
481 tgttaaggga agctgtatgt gctagacctc caacacgccg ccaggaaccc ccaaagcact
541 actctgagaa ggtaaacaac attttcacac attataaaaa atttcagctg ctctgcaacc
601 ttcctttgct aaaagttaga aacattacac cactccagca agagattaat aaataa
//