LOCUS BG067937 650 bp mRNA linear EST 12-MAY-2010 DEFINITION H3059H04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3059H04 3', mRNA sequence. ACCESSION BG067937 VERSION BG067937.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 650) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067937.1. Other_ESTs: H3059H04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3059 row: H column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..650 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3059H04-3" /db_xref="taxon:10090" /clone="H3059H04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 176 a 129 c 145 g 200 t ORIGIN 1 ggtttaaaca atttgaaaaa aagatttaga catggtttca acgagcagtt aggcatacag 61 aacagacact gacagcgaat gcttgagtgt acctgtgcct actcttgaga tcacactttg 121 aagaccgttt ttttcccccc tcttccctgt gtcctatgcc ctcatctctg tggcttaacc 181 gcttctagga attggctatg gtttgcagtg ttctgcctag cttttatggg agattgtcgt 241 catcattgtg ttaaataaca caaactttgg tttgtcatgc caccctgagc agtttgaagc 301 ttgtctgttt cacagttttc gttactaacg tctaatgctt tattttagaa aatcaactaa 361 acatgggcaa aggagatcct aaaaagccga gaggaaaatg tcctcatatg cattctttgt 421 gcaaacttgc cgggaggagc acaagaagaa gcacccggat gcttctgtca acttctcaga 481 gttctccaag aagtgctcag agaggtggaa ggtaagaggg ctttagagat gctgagtgcc 541 tctgagttgt aaattaggat gaacgggctg ggtgttctcc ttactatatg actattaaag 601 tgctttaggc tggcatattg aacatctcta tgtcaagttt acaaataatt //