LOCUS BG067836 577 bp mRNA linear EST 18-DEC-2003
DEFINITION H3058F12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3058F12 3', mRNA sequence.
ACCESSION BG067836
VERSION BG067836.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 577)
AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A.,
Tanaka,T.S., Carter,M.G. and Ko,M.S.H.
TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set
JOURNAL Unpublished
COMMENT On Jan 26, 2001 this sequence version replaced BG067836.1.
Other_ESTs: H3058F12-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3058 row: F column: 12
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..577
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3058F12-3"
/db_xref="taxon:10090"
/clone="H3058F12"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 165 a 139 c 122 g 151 t
ORIGIN
1 ctttcttaaa ttaattttca tcctttgaag gcaaattaat ttttttataa gtacagtgtc
61 catcttgaag acaggttgtg ttacaaatgt cctttttgta agtcagctgc ttggaaatca
121 ttcctgtcca gaaaccctgg caagaggaca aggcagaaag ctgtgagccg ttggcagagg
181 ctttcctggg tgcagatgct aggagtaacg ctgagacagg gccaaaggaa gctgtaagac
241 tttttgcagg tccagcggac aaggcagtta gtaacttcac caagtccaat gaattctcct
301 gatggcaaag ttcttcccct caatgtgcaa gtggtcactc agcacatgca gtccaagcca
361 gcaaacacca gtgcgctcac catccgctct cctacaactg tgctctttac tagcagtccc
421 atcaaaactg ctgtggtacc tgcatcacac atgagttctc taaatgtggt gaaaatgaca
481 acaatatccc tcacacccag taacagtaat gcgcctctta aacattctgc ctcagtcagc
541 agtgctactg gaacaacaga ggaatcaagg attgtta
//