LOCUS BG067718 694 bp mRNA linear EST 12-MAY-2010 DEFINITION H3057D09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3057D09 3', mRNA sequence. ACCESSION BG067718 VERSION BG067718.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 694) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067718.1. Other_ESTs: H3057D09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3057 row: D column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..694 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3057D09-3" /db_xref="taxon:10090" /clone="H3057D09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 127 a 222 c 170 g 175 t ORIGIN 1 cccccctctg agacagagtt ttctctgtgt aatcctggct gtcctggaac tcactctgta 61 gaccaggctg gcctcaaact cagaaatcca tctgcctctg cctcccaagt aatgggatta 121 aaggcgtgtg ccaccactgc ctggctctca ttccctcccc ccccccccat ggcagcttcc 181 atgctataat ggcagaatct aggggcttcc tcaggaatga ggtctgccaa agtctgaaat 241 gtttgctcct aggctcttga gaacccccct ttcgtgtaac ttagagagcc tgcagctgcc 301 ctgtgcacag agcttcgccc tggtctctgt gaaggttcag cgtcctccct ctgcttcctc 361 aggtttacgt gcggagaggc tacatcgcct acgagctaaa cagcctgcag caccgggagc 421 tcccagatgg cacctgtgtg gtggagttcc agttcatgct gccctcttcc caccccaacc 481 ggtagggact ggttttcctt gtttctttcc tctctgtctc gtcttcggga ggatccagca 541 agtatgcgtg gctgctgggc agaccccttc ccagccatag gtctcctgca gtcttgcgtg 601 ctcatctgtg gaacgaggac agccacccag tgtcatctcc tgtcagggac ccacaagtgc 661 tgccttgaat gcccatcagt ggacgtgaag tgac //