LOCUS BG067636 728 bp mRNA linear EST 12-MAY-2010 DEFINITION H3056E09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3056E09 3', mRNA sequence. ACCESSION BG067636 VERSION BG067636.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 728) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067636.1. Other_ESTs: H3056E09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3056 row: E column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..728 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3056E09-3" /db_xref="taxon:10090" /clone="H3056E09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 145 a 160 c 192 g 231 t ORIGIN 1 gattacctgg tggcgagtga ggtacgcctt gagatagaaa gtcttcctgc attctttgca 61 ttcgtaggct ctctcaccag tgtgagttgt ctcgtgctgc atcagttggg acttacgaga 121 gaaagctttc ctgcactctt tacattcata gggcctctcc cctgtgtagg ttttctgatg 181 ctgaatgaga tgtgacttgc gggcaaacgc attcccacat tctttacact tatgtggctt 241 ctcccctgta tgaatcttct gatgttgagt gaggtgtgaa ttacgggaga aagctttccg 301 gcattcttta cactcgaagg gcttctcccc ggtgtgcgtc ctctcatgta gagtgagctg 361 tgacctcagg tagaaagatt tcttacattc gttacattcg tagggtttct caggcgcatg 421 gattccctga tgccggatta agtgggactt gtgacagaag gctttcctgc attctttgca 481 ttcatggggt ttctcccctg tgtgcattct ctgatgtcgc tcgagctgtg acttgtggga 541 gaaagtcttc agacaatcat tacacctgaa aggtttctca ggaggaggag gtccgtgatg 601 ctgcgtgggg cttgaaacgt agaagtaaat tttcattaat tctttgcagt cactttgctg 661 ttcatctgcg cgagcgctct gatactgagg cagcagtgac ttgtggtgga aagccttgct 721 gcatgctt //