LOCUS BG067613 677 bp mRNA linear EST 12-MAY-2010 DEFINITION H3056C10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3056C10 3', mRNA sequence. ACCESSION BG067613 VERSION BG067613.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 677) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067613.1. Other_ESTs: H3056C10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3056 row: C column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..677 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3056C10-3" /db_xref="taxon:10090" /clone="H3056C10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 162 a 142 c 160 g 213 t ORIGIN 1 aacagaaaag aaagggattc gttcagagat cagaatacga agtttcctct cagcatcatg 61 gaggacacaa aataattcat tctatggtct ctgctccatt aagacttggt gctttcttca 121 gtaacagtat gtgaaatgta tttgactttg agaccccact gtgtcagtgg ggtaggattc 181 actacagcat ttctgagtct ttttcttgtt ctttactctg aactgtaaaa ttaagttcat 241 aaaggcattt ggcaagggta gaggaagctt ccatgttact aatggcgagc actgataagt 301 tgttttcatg tctctttaac aatctgcgcc cacactctga gtatttacca atatttttta 361 atattaaggc agctgttagt cggatgtgtt tagttattgg tccctctttt tcatctgtga 421 agtcccggaa gacgaggttc cttgagcctc tccgcagagc catgagtgca gcactggggt 481 ggcttgcaat ggccttctgg gctctgggcg cagagcctgt gccccccacg gtgggctgct 541 tggtagaaga tttttgattt gccacttgtc ctggttcatc ttgctttaat cctgcaagca 601 gggcatcctt tgaacagtgc ttatcctgta agtgggtaat gaaagagaac ctctgccgtt 661 ggaaaggctc acagcct //